Основы белковой хроматографии
.pdfHydrophobic Interaction Chromatography
Functional groups
–Methyl — weakly hydrophobic, for purifying compounds that have strong hydrophobic regions
–t-Butyl — mildly hydrophobic, for purifying compounds that have few or weakly hydrophobic regions
Methyl t-Butyl
Life Science Group I Chromatography
Mixed-Mode Chromatography
−Separates molecules according to size, isoelectric point and charge ...
−The best known media is Ceramic Hydroxyapatite - (Ca5(PO4)3OH)2
−It has a calcium (Ca+) phosphate (PO4-) backbone. Biomolecules interact with both.
−Monoclonal & polyclonal antibody purification
−Viruses, DNA and endotoxins removal
−DNA purification
Life Science Group I Chromatography
Mixed-Mode Chromatography
Media for Mixed-mode chromatography
–Ceramic Hydroxyapatite
–Ceramic Fluoroapatite
–New – Mixed hydrophobic and weak cation exchange
–Combines hydrophobic spacer with cation exchange functional group based on macroporous hydrophilic polymer
Life Science Group I Chromatography
Purification Strategy – Putting the Techniques Together!
Typical purification experiments will require several purification steps
As examples:
Life Science Group I Chromatography
Using a 3-Step Purification Strategy
Initial separation or clarification
Removal of insoluble material, with cell disruption
Filtration and extraction
Step 1: Capture (of target)
Concentrates product from clarified lysate; emphasis is on speed and recovery
Adsorption (Affinity, IEX)
Step 2: Intermediate
Separates the components of the now concentrated, partially purified sample; emphasis is on maximum resolution
Other Chromatography (IEX, HIC)
Step 3: Polishing
Achieves the final purity; a high resolution step that remove all other impurities
Other chromatography (CHT, Gel filtration)
Life Science Group I Chromatography
Example of a Purification Strategy in Industry
Clarification
Step #1
Step #2
Serum-free conditioned media containing cells
Harvest by centrifugation or TFF
Concentration
Affinity chromatography (protein A)
Virus inactivation (low pH incubation)
Ion exchange chromatography
TFF (virus removal)
Hydrophobic |
|
interaction |
Step #3 |
chromatography |
UF/DF to formulate
Bulk Drug Substance
Life Science Group I Chromatography
Goals For Chromatography Purification Process
Define your objectives
–Purity (>90% vs. ≥ 99.9%, type of contaminant removal needed)
–Activity (active vs. inactive)
–Quantity (ng or mg levels)
–Log reductions of key contaminants
What is known about your protein
–pH, temp stability
–Effects of salt, detergents, organic solvents, metal ions
–Post-translational modifications that must be present
Selecting the type of chromatography
–Denaturing/non-denaturing
–Resolution
–Yield
–Speed
Life Science Group I Chromatography
Typical Reasons why Proteins are Purified
•Identify the function of the protein (eg enzymes)
•Establish basic biochemical parameters eg Km
•Establish effects of activators and inhibitors on a protein function
•Crystallization to identify the structure of the protein
•Use the protein to generate a desired product eg antibodies, brewing, baking
•Produce a commercial product such as a therapeutic or diagnostic
Life Science Group I Chromatography
Applications that require biochromatography, a few examples
Purifying Proteins for Downstream assays (Functional Biology)
–Requires a few mg of proteins
–Requires the protein to be active
–Sometimes can use Tags, but the tag might affect the activity of the protein
Step 1: Express |
Step 2: |
Step 3: Perform |
Protein in |
Chromatogra- |
enzymatic or |
Culture |
phically purify |
binding assays |
|
and verify by |
|
|
SDS-PAGE |
|
Life Science Group I Chromatography
Applications that requires biochromatography, a few examples
Structural Biology
–Requires 10-100 mg of proteins
–Sometimes can use Tags, but the tag might affect the conformation of the protein
Usually require a tag clivage step
Step 1: Express |
Step 2: |
Step 3: Make |
Protein in |
Chromatogra- |
crystals (usually |
Culture |
phically purify |
many |
|
and verify by |
conditions are |
|
SDS-PAGE |
tested) |
Life Science Group I Chromatography