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Основы белковой хроматографии

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Hydrophobic Interaction Chromatography

Functional groups

Methyl — weakly hydrophobic, for purifying compounds that have strong hydrophobic regions

t-Butyl — mildly hydrophobic, for purifying compounds that have few or weakly hydrophobic regions

Methyl t-Butyl

Life Science Group I Chromatography

Mixed-Mode Chromatography

Separates molecules according to size, isoelectric point and charge ...

The best known media is Ceramic Hydroxyapatite - (Ca5(PO4)3OH)2

It has a calcium (Ca+) phosphate (PO4-) backbone. Biomolecules interact with both.

Monoclonal & polyclonal antibody purification

Viruses, DNA and endotoxins removal

DNA purification

Life Science Group I Chromatography

Mixed-Mode Chromatography

Media for Mixed-mode chromatography

Ceramic Hydroxyapatite

Ceramic Fluoroapatite

New – Mixed hydrophobic and weak cation exchange

Combines hydrophobic spacer with cation exchange functional group based on macroporous hydrophilic polymer

Life Science Group I Chromatography

Purification Strategy – Putting the Techniques Together!

Typical purification experiments will require several purification steps

As examples:

Life Science Group I Chromatography

Using a 3-Step Purification Strategy

Initial separation or clarification

Removal of insoluble material, with cell disruption

Filtration and extraction

Step 1: Capture (of target)

Concentrates product from clarified lysate; emphasis is on speed and recovery

Adsorption (Affinity, IEX)

Step 2: Intermediate

Separates the components of the now concentrated, partially purified sample; emphasis is on maximum resolution

Other Chromatography (IEX, HIC)

Step 3: Polishing

Achieves the final purity; a high resolution step that remove all other impurities

Other chromatography (CHT, Gel filtration)

Life Science Group I Chromatography

Example of a Purification Strategy in Industry

Clarification

Step #1

Step #2

Serum-free conditioned media containing cells

Harvest by centrifugation or TFF

Concentration

Affinity chromatography (protein A)

Virus inactivation (low pH incubation)

Ion exchange chromatography

TFF (virus removal)

Hydrophobic

 

interaction

Step #3

chromatography

UF/DF to formulate

Bulk Drug Substance

Life Science Group I Chromatography

Goals For Chromatography Purification Process

Define your objectives

Purity (>90% vs. ≥ 99.9%, type of contaminant removal needed)

Activity (active vs. inactive)

Quantity (ng or mg levels)

Log reductions of key contaminants

What is known about your protein

pH, temp stability

Effects of salt, detergents, organic solvents, metal ions

Post-translational modifications that must be present

Selecting the type of chromatography

Denaturing/non-denaturing

Resolution

Yield

Speed

Life Science Group I Chromatography

Typical Reasons why Proteins are Purified

Identify the function of the protein (eg enzymes)

Establish basic biochemical parameters eg Km

Establish effects of activators and inhibitors on a protein function

Crystallization to identify the structure of the protein

Use the protein to generate a desired product eg antibodies, brewing, baking

Produce a commercial product such as a therapeutic or diagnostic

Life Science Group I Chromatography

Applications that require biochromatography, a few examples

Purifying Proteins for Downstream assays (Functional Biology)

Requires a few mg of proteins

Requires the protein to be active

Sometimes can use Tags, but the tag might affect the activity of the protein

Step 1: Express

Step 2:

Step 3: Perform

Protein in

Chromatogra-

enzymatic or

Culture

phically purify

binding assays

 

and verify by

 

 

SDS-PAGE

 

Life Science Group I Chromatography

Applications that requires biochromatography, a few examples

Structural Biology

Requires 10-100 mg of proteins

Sometimes can use Tags, but the tag might affect the conformation of the protein

Usually require a tag clivage step

Step 1: Express

Step 2:

Step 3: Make

Protein in

Chromatogra-

crystals (usually

Culture

phically purify

many

 

and verify by

conditions are

 

SDS-PAGE

tested)

Life Science Group I Chromatography